This study investigates the effects of compost fermented with thermophilic Bacillaceae on carrot growth and quality. The researchers found that compost significantly increased carrot productivity, antioxidant activity, color, and taste, and altered soil bacterial composition and metabolite levels. Structural equation modeling (SEM) revealed key links between amino acids, antioxidant activity, flavonoids/carotenoids in plants and compost exposure, and between *Paenibacillus* and nitrogen compounds in the soil. Genome analysis of compost-derived *Paenibacillus* isolates supported these findings, suggesting a complex cascade of plant growth-promoting effects and nitrogen cycle modulation.