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Abstract
Studying naturalistic animal behavior remains challenging. While machine learning advances enable limb localization, extracting behaviors requires understanding spatiotemporal pose patterns. B-SOID, an open-source, unsupervised algorithm, identifies behaviors without user bias. By training a classifier on clustered pose pattern statistics, it improves processing speed and generalizes across subjects/labs. A frameshift alignment paradigm overcomes temporal resolution limitations, providing sub-action categories and kinematic measures from a single camera. This is crucial for studying rodent and other models of pain, OCD, and movement disorders.
Publisher
Nature Communications
Published On
Aug 31, 2021
Authors
Alexander I. Hsu, Eric A. Yttri
Tags
animal behavior
B-SOID
machine learning
pose patterns
unsupervised algorithm
kinematic measures
behavior identification
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