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ezBIDS: Guided standardization of neuroimaging data interoperable with major data archives and platforms

Psychology

ezBIDS: Guided standardization of neuroimaging data interoperable with major data archives and platforms

D. Levitas, S. Hayashi, et al.

Discover ezBIDS, an innovative tool designed to streamline the conversion of neuroimaging data to the BIDS standard. Developed by a team of experts including Daniel Levitas and Soichi Hayashi, this user-friendly resource requires no installation or prior knowledge, making neuroscience research more accessible. Dive into the future of neuroimaging with seamless integration and guidance for data adherence!... show more
Abstract
Data standardization promotes a common framework through which researchers can utilize others' data and is one of the leading methods neuroimaging researchers use to share and replicate findings. As of today, standardizing datasets requires technical expertise such as coding and knowledge of file formats. We present ezBIDS, a tool for converting neuroimaging data and associated metadata to the Brain Imaging Data Structure (BIDS) standard. ezBIDS contains four major features: (1) No installation or programming requirements. (2) Handling of both imaging and task events data and metadata. (3) Semi-automated inference and guidance for adherence to BIDS. (4) Multiple data management options: download BIDS data to local system, or transfer to OpenNeuro.org or to brainlife.io. In sum, ezBIDS requires neither coding proficiency nor knowledge of BIDS, and is the first BIDS tool to offer guided standardization, support for task events conversion, and interoperability with OpenNeuro.org and brainlife.io.
Publisher
Scientific Data
Published On
Feb 08, 2024
Authors
Daniel Levitas, Soichi Hayashi, Sophia Vinci-Booher, Anibal Heinsfeld, Dheeraj Bhatia, Nicholas Lee, Anthony Galassi, Guiomar Niso, Franco Pestilli
Tags
data standardization
neuroimaging
BIDS
ezBIDS
research tool
OpenNeuro
brainlife
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