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Abstract
This paper presents a deep kernel learning (DKL) model for predicting chemical reaction outcomes and optimizing reaction conditions. The model combines the feature learning capabilities of neural networks with the uncertainty quantification of Gaussian processes (GPs). It demonstrates superior performance across various input representations (molecular descriptors, fingerprints, and molecular graphs) compared to standard GPs and achieves comparable results to graph neural networks (GNNs) while providing uncertainty estimates. The model's uncertainty estimations facilitate its integration with Bayesian optimization (BO) for efficient reaction optimization.
Publisher
Communications Chemistry
Published On
Jun 14, 2024
Authors
Sukriti Singh, José Miguel Hernández-Lobato
Tags
deep kernel learning
chemical reactions
uncertainty quantification
Bayesian optimization
neural networks
Gaussian processes
optimization
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